@BarcodingPapers

barcoding and metabarcoding literature bot created by @mtgassr

Joined June 2015
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DNA barcoding continues to identify endangered species of shark sold as food in a globally significant shark fin trade hub dlvr.it/T18TmT

DNA barcoding continues to identify endangered species of shark sold as food in a globally signif...

Shark fins are a delicacy consumed throughout Southeast Asia. The life history characteristics of sharks and the challenges associated with regulating fisheries and the fin trade make sharks partic...

pubmed.ncbi.nlm.nih.gov
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Morphological, molecular identification and evaluation of antioxidant activity of seahorses from the Moroccan coasts dlvr.it/T15trs

Morphological, molecular identification and evaluation of antioxidant activity of seahorses from...

Seahorses, part of the small marine teleost fish family Syngnathidae, are increasingly under threat due to habitat degradation and overfishing. Notably used in traditional Chinese medicine, these...

pubmed.ncbi.nlm.nih.gov
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Exploring DNA barcode for accurate identification of threatened Aconitum L. species from Western Himalaya dlvr.it/T10B7x

Exploring DNA barcode for accurate identification of threatened Aconitum L. species from Western...

ITS showed the best species discrimination power and was used to develop species-specific barcodes for Aconitum species. DNA barcodes developed during the present study can be used to identify...

pubmed.ncbi.nlm.nih.gov
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Investigating the impacts of agricultural land use on soil earthworm communities: A case study of northern Zagros Mountains of Iran dlvr.it/T0ygHp

Investigating the impacts of agricultural land use on soil earthworm communities: A case study of...

Earthworms play a crucial role in the invertebrate community of soil by contributing to the belowground biomass and biogeochemical cycle. Environmental stresses, such as human activities and land use...

pubmed.ncbi.nlm.nih.gov
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Positive and negative aspects of bacteriophages and their immense role in the food chain dlvr.it/T0ygHJ

Positive and negative aspects of bacteriophages and their immense role in the food chain - PubMed

Bacteriophages infect and replicate inside a bacterial host as well as serve as natural bio-control agents. Phages were once viewed as nuisances that caused fermentation failures with cheese-making...

pubmed.ncbi.nlm.nih.gov
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A comprehensive dataset on spatiotemporal variation of microbial plankton communities in the Baltic Sea dlvr.it/T0xG3H
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Lack of local genetic representation in one of the regions with the highest bird species richness, the Peruvian Amazonia dlvr.it/T0w0Q3
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eDNA metabarcoding reveals the role of habitat specialization and spatial and environmental variability in shaping diversity patterns of fish metacommunities dlvr.it/T0w0Lf

eDNA metabarcoding reveals the role of habitat specialization and spatial and environmental...

Information is scarce on how environmental and dispersal processes interact with biological features of the organisms, such as their habitat affinity, to influence patterns in biodiversity. We...

pubmed.ncbi.nlm.nih.gov
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How non-target chironomid communities respond to mosquito control: Integrating DNA metabarcoding and joint species distribution modelling dlvr.it/T0t84j

How non-target chironomid communities respond to mosquito control: Integrating DNA metabarcoding...

The conservation and management of riparian ecosystems rely on understanding the ecological consequences of anthropogenic stressors that impact natural communities. In this context, studies investi...

pubmed.ncbi.nlm.nih.gov
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Assessment of the DNA barcode libraries for the study of the poorly-known rove beetle (Staphylinidae) fauna of West Siberia dlvr.it/T0t84Y

Assessment of the DNA barcode libraries for the study of the poorly-known rove beetle (Staphylini...

Staphylinidae, or rove beetles, are one of the mega-diverse and abundant families of the ground-living terrestrial arthropods that is taxonomically poorly known even in the regions adjacent to Europe...

pubmed.ncbi.nlm.nih.gov
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Maximising environmental pressure-response relationship signals from diatom-based metabarcoding in rivers dlvr.it/T0t84G
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Environmental DNA, hydrochemistry and stable water isotopes as integrative tracers of urban ecohydrology dlvr.it/T0t81t

Environmental DNA, hydrochemistry and stable water isotopes as integrative tracers of urban...

Urbanization and the persistent environmental changes present a major challenge for urban freshwaters and availability of water for humans and wildlife. In order to increase understanding of urban...

pubmed.ncbi.nlm.nih.gov
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Environmental DNA reveals patterns of biological invasion in an inland sea dlvr.it/T0kndD

Environmental DNA reveals patterns of biological invasion in an inland sea - PubMed

Non-native species have the potential to cause ecological and economic harm to coastal and estuarine ecosystems. Understanding which habitat types are most vulnerable to biological invasions, where...

pubmed.ncbi.nlm.nih.gov
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Non-invasive real-time genomic monitoring of the critically endangered kākāpō dlvr.it/T0jnf2

Non-invasive real-time genomic monitoring of the critically endangered kākāpō - PubMed

We used non-invasive real-time genomic approaches to monitor one of the last surviving populations of the critically endangered kākāpō (Strigops habroptilus). We first established an environmental...

pubmed.ncbi.nlm.nih.gov
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A CRISPR-based strategy for targeted sequencing in biodiversity science dlvr.it/T0jMsD

A CRISPR-based strategy for targeted sequencing in biodiversity science - PubMed

Many applications in molecular ecology require the ability to match specific DNA sequences from single- or mixed-species samples with a diagnostic reference library. Widely used methods for DNA...

pubmed.ncbi.nlm.nih.gov
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Molecular characterization of mitochondrial COI gene sequences in Micraspis allardi from Pakistan dlvr.it/T0gV9R

Molecular characterization of mitochondrial COI gene sequences in Micraspis allardi from Pakistan -...

The Coccinellidae is a highly diversified family of order Coleoptera. Coccinellid ladybirds are well known for their role as biological control agent against varied range of agricultural pests. The...

pubmed.ncbi.nlm.nih.gov
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A comprehensive phylogenomic study unveils evolutionary patterns and challenges in the mitochondrial genomes of Carcharhiniformes: A focus on Triakidae dlvr.it/T0dn6S
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Metazoa-level USCOs as markers in species delimitation and classification dlvr.it/T0dDHD

Metazoa-level USCOs as markers in species delimitation and classification - PubMed

Metazoa-level universal single-copy orthologs (mzl-USCOs) are universally applicable markers for DNA taxonomy in animals that can replace or supplement single-gene barcodes. Previously, mzl-USCOs...

pubmed.ncbi.nlm.nih.gov
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Covariation between microeukaryotes and bacteria associated with Planorbidae snails dlvr.it/T0cT07

Covariation between microeukaryotes and bacteria associated with Planorbidae snails - PubMed

Only three phyla (Amoebozoa, Opisthokonta and Alveolata) were dominant for microeukaryotes. Bacteria were more diverse with five dominant phyla (Proteobacteria, Bacteroidetes, Tenericutes, Planctom...

pubmed.ncbi.nlm.nih.gov
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Evaluation of Genetic Diversity in Quill Mites of the Genus Syringophiloidus Kethley, 1970 (Prostigmata: Syringophilidae) with Six New-to-Science Species dlvr.it/T0X6fG

Evaluation of Genetic Diversity in Quill Mites of the Genus Syringophiloidus Kethley, 1970 (Prost...

Quill mites (Acariformes: Syringophilidae) are poorly explored bird parasites. Syringophiloidus Kethley, 1970, is the most specious and widespread genus in this family. It is believed to contain...

pubmed.ncbi.nlm.nih.gov
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