@DeepLabCut

Python package for markerless pose estimation 4 animals (including humans) | free, open code

 Switzerland
deeplabcut.org
Joined February 2019
  • Tweets2.3K
  • Following2
  • Followers9.3K
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☆研究成果☆ AIで魚の「バランス喪失」を自動検出 温度への強さを客観的に測る新システムを開発 ▼プレスリリース nagoya-u.ac.jp/researchinfo/… ▼論文 doi.org/10.1038/s41598-026-6… #中山友哉 #トランスフォーマティブ生命分子研究所 #生命農学研究科 #メダカ #温度耐性 #行動解析 #DeepLabCut #AI

AIで魚の「バランス喪失」を自動検出　温度への強さを客観的に測る新システムを開発～メダカとその近縁種で系統・種による温度耐性の違いを明らかに～

【ポイント】 ・魚が高温・低温にさらされた際に体のバランスを失う瞬間（平衡感覚喪失（LOE: Loss of Equilibrium）注1））を、AI技術を用いて自動的かつ客観的に検出するシステムを開発し、これまで人によって判定がぶれやすか...

nagoya-u.ac.jp
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Gaurav Chattree@GChattreeAug 21
Using dual-color two-photon imaging, we monitored direct-pathway (dSPN) and indirect-pathway (iSPN) neurons simultaneously in awake behaving mice in baseline, parkinsonian, and dyskinetic conditions, with and without treatments @DeepLabCut
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Replying to @ShachafBen
Gorgeous!!
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Shachaf Ben-Ezra@ShachafBenJul 3
Thrilled to share our new paper in Current Biology! We combined automated behavioral tracking via @DeepLabCut with single-neuron DNA damage analysis to reveal how light pollution disrupts both sleep and genomic stability in reef fish schools.🐠 Link in the comments ⏬️
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DeepLabCut 🦄@DeepLabCutAug 20
🎂🥳 Wow! Happy 9 year anniversary of being published in @NatureNeuro #DeepLabCut 💜 - what an amazing adventure that first paper kicked off 🙏🏼 1.14M installations 💪 Original paper: rdcu.be/4Rep
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This is easily available within DeepLabCut! deeplabcut.github.io/DeepLab…
Mackenzie Weygandt Mathis, PhD@TrackingActionsFeb 6
🚨 ✨ New 3D pose estimation method from @mwmathislab! #FMPose3D allows for monocular (i.e. single camera) 2D ➡️ 3D 🔥 Led by @TiwangCS & w/@xiaoyu912huang #FMPose3D is SOTA on human & animal 3D benchmarks, & will be integrated into @DeepLabCut ⬇️👀 📝 arxiv.org/abs/2602.05755
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Ishwariya Venkatesh
@Ishwariya13Aug 12
KiMA takes standard tracking output from @DeepLabCut and gives you a suite of analysis options in a web-interface that’s basically plug and play!
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🎂🥳 Wow! Happy 9 year anniversary of being published in @NatureNeuro #DeepLabCut 💜 - what an amazing adventure that first paper kicked off 🙏🏼 1.14M installations 💪 Original paper: rdcu.be/4Rep
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DeepLabCut 🦄 retweeted
Mackenzie Weygandt Mathis, PhD@TrackingActionsJun 2
🥳 New work from my lab (@MLabofAI) just dropped on @arxiv! Measuring the shape of an animal can be highly useful for biomedical applications and for avatars 😎 We introduce *PRIMA*:🔥SOTA 2D➡️3D animal shape by @xiaoyu912huang, @TiwangCS & I! 📝 arxiv.org/abs/2606.02366
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Mackenzie Weygandt Mathis, PhD@TrackingActionsFeb 6
🚨 ✨ New 3D pose estimation method from @mwmathislab! #FMPose3D allows for monocular (i.e. single camera) 2D ➡️ 3D 🔥 Led by @TiwangCS & w/@xiaoyu912huang #FMPose3D is SOTA on human & animal 3D benchmarks, & will be integrated into @DeepLabCut ⬇️👀 📝 arxiv.org/abs/2602.05755
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Replying to @Sopuruchi_xo
You got this 🔥🕺🏼💃🏼💪
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本書は、代表的なAIツール「DeepLabCut」の使い方も、PCのスペックなど初歩から丁寧に解説します😀
羊土社 実験医学
@Yodosha_EM18 Dec 2025
新刊『知識ゼロから始める　AIによる動物行動解析』が本日発行です📕 ☑️カメラや飼育環境のセットアップ ☑️DeepLabCutやYOLO，その他ツールの使い方 ☑️マウス・ラットの解析はもちろん，サルや魚，ハエ，線虫まで が詰まった日本初の動物行動解析の実践書🧐 発展として高精度な解析を自分で実装する方法や，委託解析もご紹介します😀 💻購入者特典として、プログラムコードがダウンロードできます yodosha.co.jp/jikkenigaku/bo… ※書店店頭に並ぶまでに時差があります。
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Replying to @Yodosha_EM
So cool - could you send us a link to the book?
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Hiroshi Matsui@compPsyHM24 Dec 2025
New preprint out! 🐦 We show that crows dynamically adjust their feeding depending on what the other bird does, and the effect is asymmetric across dominance–subordinate ranks. Behavior tracking was done with DeepLabCut.@DeepLabCut biorxiv.org/content/10.64898…
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Nencki Open Lab@nenckiJan 26
We are super happy to announce the fifth edition of our Transatlantic Behavioural Neuroscience School, that will be held Aug 11-22nd in Poland! Join us to learn everything you need to build your behavioural setup with open source tools!
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Our new study in Sports Engineering shows that markerless athlete tracking using deep learning (@DeepLabCut ) achieves good–excellent validity vs. optoelectronic systems, with accurate estimates of player position and velocity. l1nq.com/YSWVY
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AI tools like @DeepLabCut and SuperAnimal are changing how scientists study movement, helping them understand how brain activity drives behavior. Read more: bit.ly/4qnX7JF @TrackingActions

How AI Is Changing Neuroscience Discovery

AI is altering how scientists study the brain

kavlifoundation.org
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Replying to @Sopuruchi_xo
You can; please see all our demo notebooks for examples: deeplabcut.github.io/DeepLab…
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Nencki Open Lab@nencki20 Nov 2025
Replying to @Nyktofob
@Nyktofob running a @DeepLabCut workshop for Heidelberg Open Lab!
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2/ Fear conditioning often scores a single behavior: freezing. We went further. 82 mice (2 cohorts). Early life stress (limited bedding and nesting). 🐭 @DeepLabCut , #SimBA & #keypointMoSeq to capture the full behavioral repertoire.
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