LinkedIn: https://xitter.cf/t.co/UUxTUQV0Q6 Semantically curating genotype-phenotype knowledge #OpenScience #Collaborative #Data
Joined August 2014
- Tweets1K
- Following356
- Followers1.1K
- Likes965
Pinned Tweet
Twitter/X no longer aligns with our values; we are intentionally choosing to communicate about our work using other media. More info (including where to find us): monarchinit.medium.com/monar…
Monarch Initiative retweeted
linkedin.com/posts/chrismung… read about our @MonarchInit Chat GPT plug-in over on the non X site!
Monarch Initiative retweeted
Shawn O’Neil, PhD, MS, assistant research professor in @CUBiomedInfo and member of the @MonarchInit, was recently featured in @GenomeWeb to discuss how #artificialintelligence fits into the world of genomics.
genomeweb.com/informatics/bu…
Monarch Initiative retweeted
New video! 🚨
Hear firsthand how @mattmight at @uabprecisionmed used the @MonarchInit resource and ultimately shortened his son's diagnostic and therapeutic odyssey. (ORIP support through R24OD011883) #ORIPResources
orip.nih.gov/resource-direct…
Monarch Initiative retweeted
A Simple Standard for Sharing Ontological Mappings (SSSOM) Workshop for OHDSI Europe #OHDSISocialShowcase #JoinTheJourney
Lead: Nicolas Matentzoglu
Co-Author: Melissa Haendel
Full Poster: loom.ly/YjudDmk
Monarch Initiative retweeted
Our Board Member @monimunozto presenting in #BOSC2023 on standards to connect biomedical and behavioral data to AI in the Bridge2AI program #ISMBECCB2023
Monarch Initiative retweeted
@MonarchInit @hp_ontology The long-awaited manuscript on MAxO is out today! medrxiv.org/content/10.1101/…
A huge congratulations to @NicoMatentzoglu for winning the International Society for Biocuration’s Excellence in #Biocuration Advanced Career Award! We are so proud of you! @biocurator link.medium.com/TWQNd3wnLAb
Monarch Initiative retweeted
We added a howto guide to the @linkml_data docs on generating AI prompts from LinkML schemas. linkml.io/linkml/howtos/gene…, making use of the new feature in the @OpenAI API to structure results as JSON platform.openai.com/docs/gui… 🧵
Monarch Initiative retweeted
The OntoGPT framework and SPIRES tool by @chrismungall 's team provide a principled approach to extract knowledge graph from unstructured text using GPT. Here is my impression. apex974.com/articles/ontogpt…
Monarch Initiative retweeted
This work would not have been possible w/o the incredible effort of the model organism databases (@mgi_mouse, @ZFINmod, @FlyBaseDotOrg, @wormbase, & @yeastgenome) and pan-species resources like @alliancegenome and @MonarchInit.
[13/n]
Join us in celebrating our new #collaboration with the @CPathInstitute! Learn more about our work to improve #drugdiscovery for #rarediseases here:
link.medium.com/Qkc22sufjAb
#teamscience #translationalscience #healthcare
Monarch’s very own @NicoMatentzoglu is nominated for the Excellence in #Biocuration Advanced Career Award through @biocurator! Voting is open today through 6 June 2023! biocuration.org/excellence-i…
#careerexcellence #weareproudofyou
Monarch Initiative retweeted
Are #LLMs capable of interpreting the results of high-throughput genomics experiments? Given a list of genes (e.g. all genes over expressed under a certain condition), can an LLM tell us what those genes have in common, suggesting underlying biological mechanisms? 🧵
#Exomiser ranks potential rare Mendelian disease-causing #variants from whole-exome or whole-genome sequencing data. Learn more here: youtu.be/tzwvWkb3s8A
#RareDisease #OpenScience #BigData #Collaborative #TranslationalScience #Disease #Genomics #Healthcare
The @MonarchInit Biolink Model Brings Data Together! Find out more about our top 3 most downloaded papers in 2022 from the journal ASCPT here: ascpt.org/Journals/CTS/Trans…
#BiolinkModel #TeamScience #Collaboration #RareDisease #DrugRepurposing #TranslationalScience @linkml_data
Find the link to @chrismungall's SWAT4HCLS 2023 conference Keynote on our Mastodon account here: genomic.social/@monarch_init…
TOMORROW! Don't miss @monimunozto's presentation about Monarch Initiative's data reuse practices as part of the session “Connecting Phenotypes and Genotypes Using Data Science”, Apr 25 1:15–2:00pm ET.
Free registration: us06web.zoom.us/webinar/regi…
Join Monarch and other DataWorks! Prize recipients at a free online symposium (organized by @NIHDataScience and @FASEBorg) on April 25 about best practices in data sharing and reuse! #OpenScience #OpenData #DataReuse
monarchinit.medium.com/monar… @monimunozto
Monarch Initiative retweeted
Interesting use of GPT to build structured knowledge bases from unstructured text using Large Language Models. @chrismungall et al monarchinit.medium.com/spire…
Monarch Initiative retweeted
@andrewwhite01 you asked me the other day about ontologies. This, from folks at @MonarchInit, is a great example of how useful they can be as a cookie-cutter to an LLM. github.com/monarch-initiativ…
