Developing computational methods for biomedical research at @TampereUni with the lead of prof. Matti Nykter.
Tampere, Suomi
Joined March 2018
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- Following89
- Followers344
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Nykter Lab retweeted
Spatial transcriptomics (and other -omics!) is a promising technology that offers more information about cellular systems. @KiviahoAntti gives us a taste of new discoveries with @NykterLab using spatial transcriptomic in prostate cancer tissue.
tumorgenetics.blog/2024/12/1…
Nykter Lab retweeted
Our investigation into the prostate tumor microenvironment is now out in Nature Comms: nature.com/articles/s41467-0…
We combined publicly available scRNA-seq data with in-house spatial transcriptomics samples to jointly anayze data from 120 patients. Here’s what we found 🧵 1/6
Nykter Lab retweeted
Communication is important even at the intra-cellular level. @SiniHakkola @NykterLab explains its role in cancer development in our latest blog post: tumorgenetics.blog/2024/05/0…
Nykter Lab retweeted
Could club cells be the key to understanding prostate cancer therapy resistance? We performed integrative analysis on single-cell & spatial transcriptomics data from more than 100 patients. Preprint out now: biorxiv.org/content/10.1101/…
Nykter Lab retweeted
Tune in to our latest blog post to read about the fierce competition between lab technician and automation robot: "Can we still beat a robot?" by Juuso Vuorinen @NykterLab
tumorgenetics.blog/2024/02/0…
Nykter Lab retweeted
Congratulations to Ebrahim Afyounian and Thomas Fleischer @TF_82 for a good defence on Friday! We had a wonderful evening celebrating the closing of Ebrahim’s journey to PhD @NykterLab. 🥰
Nykter Lab retweeted
Our new study shows that immunological pathways differ in different subtypes of #type1diabetes and the involvement of #enteroviruses in the initiation of the process. go.nature.com/3Rdg5U2
Privileged to work with the talented people from the @NykterLab and @RautajokiLab 🙏
Nykter Lab retweeted
New blog out: “What are scientific studies made of?” by Lauri Ryyppö of @NykterLab
tumorgenetics.blog/2023/06/1…
Nykter Lab retweeted
Another
@Prostatakreft
#blueribbonpin has been appointed for #prostatecancer #research! Congrats Dr Sinja Taavitsainen (lnkd.in/d7M9j4TJ) for the brilliant defence vs @jweischenfeldt . Supervision of Prof. #MattiNykter @NykterLab #Tamperepcrc @TampereUniMET @TampereUni
Nykter Lab retweeted
Today we had a great recreational day at #Ahtialanjärvi with @NykterLab, building nesting boxes for endangered bird species and observing some birds.
Nykter Lab retweeted
Come to talk @NykterLab at the poster19-line43 at the #aacr23 #prostatecancer #spatialtranscriptomics #spatialbiology #celltype #deconvolution
Nykter Lab retweeted
@CoEinTG Fascinating updates and important discussions at the SAB (Scientific Advisory Board) meeting of the Centre of Excellence in Tumor Genetics today. Tomorrow we will continue with workshops to discuss further and deepen our collaborations.
#cancerresearch
Nykter Lab retweeted
Here’s our @Nature paper on v deep whole-genome sequencing of serial ctDNA and met tissue. @cherberts1, Matti, Joonatan et al applied new methods to give fascinating insight into temporal #ProstateCancer clonal complexity and evolution of resistance. 1/7 nature.com/articles/s41586-0…
Nykter Lab retweeted
Large grant recipients Steve Bova and Matti Nykter are reverse engineering the evolution of aggressive prostate cancer. The results can help develop new cures for prostate cancer.
sigridjuselius.fi/en/news/st…
@NykterLab @TampereUniMET @TampereUni
#EWAC2022 #cancer
Nykter Lab retweeted
Very excited to receive @SuomenAkatemia funding to continue studying human microglia in neurodegeneration! Big thanks to my mentors @zauggj @HiltunenLab and of course the members of the labs, and I look forward to continuing this field of research in @NykterLab @TampereUni
Nykter Lab retweeted
Our paper on 3D analysis of prostate tissue and #prostatecancer tumor #histopathology is out! “Spatial analysis of histology in 3D: quantification & visualization of organ and tumor level tissue environment"
cell.com/heliyon/fulltext/S2…
Nykter Lab retweeted
It's important to understand how cancer alters the surrounding tissue in order to understand tumor progression and why some tumor cells are resistant to treatments.
New blog out!
From Smoothies to Fruit Tarts: The Development of Spatial Transcriptomics”
tumorgenetics.blog/2022/01/1…
Nykter Lab retweeted
Uusi vuosi 2022!✨Professori Matti Nykterin tutkimusryhmä on neljäs suurapurahan saaja. Nykterin johtama tutkimusryhmä Tampereen yliopistolla selvittää syövän molekyylitason mekanismeja ja tutkii erityisesti eturauhassyöpää.
syopasaatio.fi/myonnetyt-apu…
#tutkimus #syöpä #syöpätutkimus
Nykter Lab retweeted
In this paper Steve Bova @TampereUni, @TampereUniMET and co-workers identified phenotypes and characteristics associated with lethality of prostate cancer in more details than ever before. Congrats to the authors. sciencedirect.com/science/ar…
