@SamarthPhD
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He/him | computational biologist
Joined June 2021
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Thank you @sse_evolution presidents for honoring my dissertation work with such great recognition. Looking forward to attending the @Evol_mtg in Montreal and celebrating with everyone. š„³
For those who are interested, article link (itās open access): doi.org/10.1093/evolut/qpac0ā¦
This yearās SSE Presidentsā Award goes to Dr. Samarth Mathur for his paper, āAn evolutionary perspective on genetic load in small, isolated populations as informed by whole genome resequencing and forward-time simulations.ā shorturl.at/f45PN
@SamarthPhD @journal_evo
ALT Headshot of Samarth Mathur. Text: Samarth Mathur, An evolutionary perspective on genetic load in small, isolated populations as informed by whole genome resequencing and forward-time simulations, Society for the Study of Evolution SSE Presidents' Award for Outstanding Dissertation Paper in Evolution.
Excited to share this press article highlighting our recent paper. We looked at the benefits and risks of genetic rescue & developed new metrics to quantify genomic compatibilityāto evaluate potential benefits and risks of rescue efforts
news.osu.edu/genetic-rescue-ā¦
Can we safely use assisted gene flow to rescue endangered species without making things worse?
š§¬ Our new study in @molecology use newly devised metrics to explore genomic compatibility in Massasauga rattlesnakes, showing the trade-offs of genetic rescue.
doi.org/10.1111/mec.70014
Thanks Texas Chapter of the @wildlifesociety for this incredible honor. Congratulations to all the coauthors.
#TCTWS
doi.org/10.1093/evolut/qpac0ā¦
Congrats to Drs. Mathur, TomeÄek, Tarango-ArĆ”mbula & Perez; our genetic load paper recently won the Outstanding Scientific Publication Award from the Texas Chapter of The Wildlife Society (its 2nd best paper award) :) @sse_evolution @SamarthPhD
academic.oup.com/evolut/artiā¦
Samarth Mathur retweeted
Detectability of runs of homozygosity is influenced by analysis parameters and population-specific demographic history
journals.plos.org/ploscompbiā¦
Super excited to see our Montezuma Quail cover on the Evolution and Evolution Letters banner at #Evol2024. Thank you Melinda and @sse_evolution for printing these cute quail stickers. Anyone and everyone who picked up these stickers at the booth, thank you too!! #evolution2024
Samarth Mathur retweeted
Current and former lab members/affiliates at #Evol2024, weāre planning an informal lab social on Sunday evening; please feel free to join us! Details TBD but likely ~6-9ish somewhere with food and drinks @AndrewMularo @SamarthPhD
Earlier this month, I was invited back to Purdue by @PU_OIGP to give the Closing Keynote Seminar at the 2024 Spring Reception where I discussed my research and journey in the fields of computational biology, genomics, and cancer.
More information here: purdue.edu/gradschool/oigp/eā¦
Samarth Mathur retweeted
Congratulations to former PhD student Dr. Samarth Mathur! Samarth won the Outstanding Dissertation Paper award from the Society for the Study of Evolution for his 2023 paper in Evolution. Great job, Samarth!
academic.oup.com/evolut/artiā¦
Glad to be a part of this study published today in #BMCEcoEvo @BMC_series examining the evolutionary history of Speckled Dace, a fascinating and unique desert fish, using genomics and bioinformatics. Congratulations to all the coauthors!
New open access paper from my lab about Oregonās endemic Foskett Spring Speckled Dace.
Genetic approaches reveal a healthy population and an unexpectedly recent origin for an isolated desert spring fish. BMC Ecol Evo 24, 2 (2024). doi.org/10.1186/s12862-023-0ā¦
Samarth Mathur retweeted
New in ME!
Snake fungal disease (SFD) infects >40 š species. Experimental transcriptomics by @SamarthPhD et al show SFD is likely systemic with chronic effects on hosts with š„¶āļø temperature often resulting in severe responses.
link-> buff.ly/47Bp3A7
šø @AnacondrewMason
Samarth Mathur retweeted
My commentary in PNAS on a very nice genomics paper on endangered Massasauga rattlesnakes by @SamarthPhD Samarth Mathur, Lisle Gibbs, @GibbsLabOSU et al. xitter.cf/SamarthPhD/status/1714ā¦
Stemming from the discourse in conservation bio & molecular genetics, our study shows adaptive & neutral variation is indeed correlated, But itās more nuanced, as recent population declines breaks the link & makes future assessments less predictable
| PNAS tinyurl.com/FgdNgd
Samarth Mathur retweeted
Is neutral genetic variation a good predictor of the variation that matters? pnas.org/doi/10.1073/pnas.23ā¦
How do infected snakes respond to Snake Fungal Disease, an emerging pathogenic disease that infects over 40 snake species? Does temperature play a role in host resistance and recovery?
Find out in our new article in @molecology where we explore these Qs š§µ
tinyurl.com/SFD-RNAseq
Conclusion:
SFD may be a systemic disease where chronic fungal infections might lead to the most profound physiological changes. We report candidate genes and putatively functional loci that can help future studies to improve our understanding of SFD hostāpathogen dynamics.
Thanks to the coauthors and labs who collaborated on this work @GibbsLabOSU @Turtle_Doc @WildlifeEpiLab Ellen Haynes.
Funding: @OhioDivWildlife @OhioState and @EEOB_OSU