@StatGenomics

We're moving to Bluesky - come join us: https://xitter.cf/t.co/nHQ8M13K8Z

 Heidelberg, Germany
Joined September 2013
  • Tweets62
  • Following53
  • Followers3.2K
1Media
Stegle Lab retweeted
DKFZ@DKFZ9 Aug 2024
Apply now for the DKFZ #Postdoc|toral Fellowships at the German #Cancer Research Center, covering all areas of #cancerresearch, including #epigenetics, #genomics, #stemcells, #radiooncology, #epidemiology. To apply for your #PostdocFellowship visit ➡️ t1p.de/4t3fp
11
23
3,272
New Paper up! Great multi-lab team effort with @gagneurlab @anshulkundaje to establish a repository of ML models in genomics.Give @KipoiZoo a go!Large collection of ready-to-use models to predict molecular outputs from splicing to TF binding and more! nature.com/articles/s41587-0…
3
94
3
184
We are recruiting for an MRC Programme Leader at Director of Research level, in Statistical Methodology for Systems Omics #statistics #recruiting @MRC_BSU @Cambridge_Uni. Deadline for applications: 25th March jobs.cam.ac.uk/job/20465/
14
1
7
Paper on interpretable and sparse factor analysis for scRNA-seq is up. Generalises scLVM; software for R & python! genomebiology.biomedcentral.…

f-scLVM: scalable and versatile factor analysis for single-cell RNA-seq

Genome Biology - Single-cell RNA-sequencing (scRNA-seq) allows studying heterogeneity in gene expression in large cell populations. Such heterogeneity can arise due to technical or biological...

link.springer.com
1
38
64
New lab paper on imputing single-cell methylation states using deep learning is up @cangermueller genomebiology.biomedcentral.… – at Rome, Lazio

DeepCpG: accurate prediction of single-cell DNA methylation states using deep learning

Genome Biology - Recent technological advances have enabled DNA methylation to be assayed at single-cell resolution. However, current protocols are limited by incomplete CpG coverage and hence...

link.springer.com
30
33
New lab preprint is up! Statistical method for decomposing scRNA-seq variability. biorxiv.org/content/early/20…
2
29
2
39
Replying to @hipsci
great to see the first batch of proteomics data public. More to come. Huge effort by the Lamond lab in Dundee! – at London, England
1
2
Stegle Lab retweeted
hipsci@hipsci26 May 2016
A pre-print of @hipsci first major analysis is now available in @biorxivpreprint hipsci.org/announcements/hip…
9
3
New paper on improved trans eQTL mapping using local gene networks is up! genomebiology.biomedcentral.…

Modelling local gene networks increases power to detect trans-acting genetic effects on gene...

Genome Biology - Expression quantitative trait loci (eQTL) mapping is a widely used tool to study the genetics of gene expression. Confounding factors and the burden of multiple testing limit the...

link.springer.com
2
17
16
#MLCB workshop at #NIPS2015 is happening again this year. Deadline for abstracts: Oct 4. check out: mlcb.org/
6
4
New paper on a random forest approach to map genetic effects is out! nature.com/ncomms/2015/15062…
20
19
Stegle Lab retweeted
EMBL-EBI@emblebi15 Jun 2015
A new method and algorithm to speed up complex GWAS analyses - ebi.ac.uk/about/news/press-r… @StatGenomics @OliverStegle @naturemethods
19
13
New paper on multi-trait Efficient set tests is up! nature.com/nmeth/journal/vao…
2
29
15
I hope bankers, economists, policy makers, journalists, EVERYONE at #wef15 #Davos is listening to this http://t.co/gETcZQmfHu ! [5/5]
5
1
Damien Arnol starts PhD in our group in collaboration w. Stegle @StatGenomics on the modelling of single cell data
1
Fatemeh Zamanzad Ghavidel starts w. our group jointly with Stegle @StatGenomics & Brazma
2
Stegle Lab retweeted
EMBL-EBI@emblebi22 Sep 2014
New method by EMBL-EBI and Microsoft Research improves statistical power of genome-wide association studies.: ... bit.ly/1rgeBVq

Taking the guesswork out of genetic analysis

New method by EMBL-EBI and Microsoft Research improves statistical power of genome-wide association studies

ebi.ac.uk
1
2
Stegle Lab retweeted
EMBL-EBI@emblebi29 Apr 2014
What is Life? #scisoc event is now on Facebook: facebook.com/events/14399391…
6
2
The registration deadline for #EMBO PC Genotype to Phenotype Mapping is this Friday! @emblebi @StatGenomics ebi.ac.uk/training/course/Ge…
1
1
Check out the #EMBO practical course on #genotype-to-#phenotype mapping @emblebi @OliverStegle @StatGenomics ebi.ac.uk/training/course/Ge…
1
Load more