@The_MicroMatrix

Microbial cultivation based on Meta-omics Assisted, Targeted soRting and Isolation in a customized matriX - A BMBF funded project.

Joined August 2021
  • Tweets22
  • Following9
  • Followers8
A three-colour stress biosensor reveals multimodal response in single cells and spatiotemporal dynamics of biofilms NPJ Biofilms and Microbiomes from @RabeKersten @KITKarlsruhe nature.com/articles/s41522-0…
2
22
84
7,366
Hands-on workshop single-cell genomics & bioinformatics - still places available! Application for the workshop @kasterlab @KITKarlsruhe from 21-25.11.22 is open until📅 Nov 1st Registration & info👉 t1p.de/i1id8 Please RT!
Kaster Lab@kasterlab7 Oct 2022
🚨Looking to gain hands-on experience in microbial single cell genomics wet-lab and bioinformatics methods? Then please consider applying to our workshop being held Nov. 21-25, 2022 in Karlsruhe, Germany. Application deadline is Nov. 1! 👉vaam.de/die-vaam/fachgruppen… @VAAM_Microbes
8
5
MicroMatrix retweeted
Kaster Lab@kasterlab7 Oct 2022
🚨Looking to gain hands-on experience in microbial single cell genomics wet-lab and bioinformatics methods? Then please consider applying to our workshop being held Nov. 21-25, 2022 in Karlsruhe, Germany. Application deadline is Nov. 1! 👉vaam.de/die-vaam/fachgruppen… @VAAM_Microbes
10
1
12
New paper on preprint - now submission. Novel stress senor offering interesting insights into diverse cellular stress reponses 🦠🧪🧐🤓Great work spearheaded by Ahmed Zoheir. If someone is interested in the plasmids, get in contact, we like others to use them.
bioRxiv@biorxivpreprint25 Sep 2022
A genetically-encoded three-colour stress biosensor reveals multimodal response at single cell level and spatiotemporal dynamics of biofilms biorxiv.org/cgi/content/shor… #bioRxiv
1
2
8
MicroMatrix retweeted
Kaster Lab@kasterlab7 Sep 2022
‼️ We’re seeking a highly motivated PostDoc for bioinformatic data analyses and pipeline development. Your research will be focused on analyzing metagenomic data from complex microbial communities, as well as single cells. 1/2
3
56
2
78
⚠️NEW DATE VAAM2023 To ensure an in-person meeting in 2023 & to avoid restrictions due to COVID & an energy crisis in winter we decided to postpone #VAAM2023 from February to September 10-13 Many thanks for your understanding&see you all in Göttingen! t1p.de/j55z
17
2
15
⚠️PhD position Microbiology in Microbial Biochemistry group @JurgenLassak, LMU Munich 👉t1p.de/15tu
17
1
19
MicroMatrix retweeted
Kaster Lab@kasterlab20 May 2022
Our genome assessment pipeline for microbial dark matter, MDMcleaner, is now available via Pip & Conda! Also check out the corresponding publication at NAR: doi.org/10.1093/nar/gkac294

How clear is our current view on microbial dark matter? (Re-)assessing public MAG & SAG datasets...

Abstract. As of today, the majority of environmental microorganisms remain uncultured and is therefore referred to as ‘microbial dark matter’ (MDM). Hence,

academic.oup.com
17
1
75
MicroMatrix retweeted
Kaster Lab@kasterlab19 May 2022
Finally got everyone together for a new group photo 🥳
1
1
7
MicroMatrix retweeted
analytica@analyticaFair3 Jan 2022
Most-read analytica news: Taking microbes out of dark and into the light – @The_MicroMatrix research alliance develops 🆕 methods for screening, cultivating #biotech.nologically promising microorganisms analytica-world.com/en/news/… #bioinformatics #biology #chemistry 📸 Ahmed Zoheir
Microorganisms feel at ease in biofilms. In the microscope image, they are marked in different colors.

ALT Microorganisms feel at ease in biofilms. In the microscope image, they are marked in different colors.

1
6
8
Nach einem Monat Twitterpause melde ich mich mit meiner persönlichen Covid-Erfahrung zurück. Seit drei Tagen bin ich aus dem Krankenhaus - davon 19 Tage auf der Intensivstation - zurück. Mit meinem neuen ständigen Begleiter, der Sauerstoffstation. Ich war ungeimpft. 1/5
489
1,619
295
5,495
Replying to @VAAM_Microbes
Given the current situation, we have no choice but to move to an online format. Please spread the word. More details to come beginning of next year.
13
1
12
We are so sad to announce that VAAM Annual Conference 2022 is going online again😢 the current COVID situation leaves us no choice. Please stay in touch, more details will follow in January and we are determined to make the best out of it! t1p.de/qlge
23
33
MicroMatrix retweeted
FrunzkeLab@FrunzkeLab21 Dec 2021
With a heavy heart but for the sake of sanity, we are moving VAAM 2022 to an online format. Details will follow in early January. There is an exciting program ahead and we will make the very best of the situation! @VAAM_Microbes
VAAM - Vereinigung f. Allg. u. Ang. Mikrobiologie@VAAM_Microbes15 Dec 2021
High time to register for the @VAAM_Microbes Annual Conference 20.-23.2.2022! Early registration with reduced registration fee ends today: t1p.de/u94o
2
11
1
34
#OnTheCover: Modeling-Assisted Design of Thermostable Benzaldehyde Lyases from Rhodococcus erythropolis for Continuous Production of alpha-Hydroxy Ketones (Rabe) @NiemeyerLab @RabeKersten onlinelibrary.wiley.com/doi/…
1
4
10
A Modular System for the Rapid Comparison of Different Membrane Anchors for Surface Display on Escherichia coli (@RabeKersten) @NiemeyerLab #OpenAccess onlinelibrary.wiley.com/doi/…
3
8
Load more