An open source platform for managing, processing, and sharing biomedical data at any scale.
Boston, MA
Joined May 2013
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Please join us for our bi-weekly video chat 10am Eastern tomorrow (2025/02/28). Or come in-person, if you are in the Boston-area.
Video chat 10am Eastern tomorrow (2025/02/28). Come chat about CWL, @Arvados, and end-to-end-open AI. Curii will sponsor CWL / AI / PGP related internships this summer. So, a good chance to start discussing your favorite project ideas.
teapaw.org/PGorg/status/187890902…
See George Church (@geochurch )and other great speakers at the Arvados Summit.
Arvados = open source platform for running production workflows and managing PBs of data.
summit.arvados.org/
Fun Fact: Arvados grew from the Harvard PGP Project ! #openscience #SciWorkflows
Arvados retweeted
Don't reinvent the wheel. There are -lots- of great tools available to start with - including @arvados.
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Want to know more about Arvados but don't have a lot of time? Check out this new video -- Intro to Arvados in a Minute!
youtube.com/watch?v=XXeUNUCO…
#OpenScience #CommonWL #Arvados #opensource #BigData #Bioinformatics
Arvados 2.4.2 released!
In addition to new features, bug fixes, and performance improvements, this release fixes a critical security vulnerability; all users are advised to upgrade as soon as possible, details here:
arvados.org/release-notes/2.…
Happy to hear it! Feel free to drop in to talk to Arvados developers during our user group or gitter channel if you have any questions.
arvados.org/community/
Come say hello to @peteramstutz at BOSC2022. He is giving a talk about Data and Scientific Workflow Management this Thursday! He also has a poster (sneak peek included) open-bio.org/events/bosc-202… #OpenScience ##BOSC2022 #Commonwl #sciworklows
Interested in using the Arvados Python SDK? Check out this cookbook for "real-world" examples to get you started: doc.arvados.org/sdk/python/c… #SDK #python #arvados
Check out this talk presented by @peteramstutz at BOSC2021 -- Building a Federated Data Commons with Arvados: youtube.com/watch?v=1fDbSy4_… #video #arvados #opensource
We will be starting the biweekly Arvados user group video chat shortly, anyone interested in talking to the developers are invited to join, details here: forum.arvados.org/t/arvados-…
Did you know you could mount the Arvados Keep Storage System to access data using traditional filesystem tools? See how here: doc.arvados.org/user/tutoria… #arvados #opensource
Want some help writing high-performance portable CWL workflows in Arvados? Check out these guidelines: doc.arvados.org/user/cwl/cwl… #arvados #opensource #sciworkflows
In the mood to watch some videos? Here are some ones about Arvados! youtube.com/channel/UCoct4W7… #arvados #opensource #sciworkflows
Arvados is under active development. Wanna see about the most recent releases? Check out the release pages to read about frozen projects, GPU support, checking metadata properties, and more! arvados.org/release-notes/ #arvados #sciworkflows
Wanna run production CWL workflows that use thousands of cores of compute simultaneously? Arvados is used at top-10 pharma companies to run workflows with over 8000 parallel samples and 25,000 workflow steps. arvados.org #arvados #sciworkflows #Commonwl
Want know how to use GPUs at scale with Arvados? Check out this blog post! arvados.org/2022/04/14/gpus-…
#GPU #opensource #sciworkflows #arvados