Pablo Chacon retweeted
Finally out. It took us more than expected, but here it is, and Editor's choice!!! FANTASIA is an ultra-configurable tool to search the embedding space for annotation transfer. In a nutshell: two modes, a full extensible package and a lite version. It is not a prediction tool.
Pablo Chacon retweeted
🌎👩🔬 For 15+ years biology has accumulated petabytes (million gigabytes) of🧬DNA sequencing data🧬 from the far reaches of our planet.🦠🍄🌵
Logan now democratizes efficient access to the world’s most comprehensive genetics dataset. Free and open.
doi.org/10.1101/2024.07.30.6…
Pablo Chacon retweeted
In mitochondria, respiratory supercomplexes (blue) pump protons across crista membranes to create an electrochemical gradient, fueling adenosine triphosphate (ATP) synthase (pink) to regenerate ATP—the energy currency of life.
Now, cryo–electron tomography captures these supercomplexes in their native organization, illuminating how the coordinated action of these molecular machines drives life’s fundamental energy conversion.
Learn more this week in Science: scim.ag/3FQ6bEh
Pablo Chacon retweeted
We present DRGN-AI for fast, ab initio cryo-EM reconstruction!
* learns a neural field from unposed images,
* designed for single-shot reconstruction of unfiltered datasets,
* finds new states missed by prior approaches!
Teamwork led by @ZhongingAlong
drgnai.cs.princeton.edu/ 1/
Pablo Chacon retweeted
Examples from our Protein Common Assembly Db now on @biorxiv_bioinfo with @QifangXu. Viable assemblies for all Xray structures (EPPIC, @josemduarte), clustered w/ cryoEM, NMR assemblies by Pfam architectures + stoichiometry+ symmetry + interfaces. @buildmodels @PDBeurope @pdbj_en
The Protein Common Assembly Database (ProtCAD): A comprehensive structural resource of protein complexes biorxiv.org/cgi/content/shor… #biorxiv_bioinfo
Pablo Chacon retweeted
@chaconlaborg Last week, after a minor ransomware attack the Spanish cybersecurity authorities (CCN y COCS) decided to disconnect from the internet the whole Spanish national research council (CSIC). Our primary research agent is inoperative and nobody cares. It´s shameful.
Pablo Chacon retweeted
Mini Symposium on Structural Bioinformatics in memoriam Angel Ramirez Ortiz, a great scientist prematurely passed away 10 years ago. Monday May 28. #cbmso
Pablo Chacon retweeted
El Gobierno solo gastó tres de cada 10 euros presupuestados para I+D en 2017 elpais.com/economia/2018/04/… vía @elpais_economia
