Shawn Taylor (@dataEcologist) header
Shawn Taylor (@dataEcologist) profile picture

Senior GIS analyst. Ecologist and scientific programmer. #iamabotanist

USA
Joined November 2015
The Valley Fire yesterday, Oct 4, at 12:30pm. From the Sentinel-2 satellite. #ValleyFire #Boise #idfire
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Replying to @mouthofmorrison
Hey you guys need a better map of where this free sample data is in the world, I made one here github.com/sdtaylor/UmbraOpe…
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Not the exact same position, but this description from another station is likely similar.
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In the SW USA and down through the tropics we have "viny" milkweeds in the genus Funastrum. #iamabotanist
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We also surmise that with high resolution imagery, sparse vegetation becomes advantageous. As seen in this drone photo, each plant easily be singled out. In the future be on the lookout for remote sensing of the phenology of *individual plants* instead of just pixels. 3/4
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This is what happens when you play with fire
A recent manuscript, after acceptance, had the figures absolutely butchered by the editorial office by changing line widths, redoing text, moving legends around, etc. Is this common? From now on if I see any indication a journal does this then no way am I submitting to them.
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A @PhenoCam at a @NEON_sci site outside Phoenix recorded a flash flood in August. Dates are Aug 2, 11, 29, and Oct. 9. Great stream ecology here. The bed is wider, future flows will be shallower. Plants are establishing on new banks, and scouring underneath them is A+ habitat.
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tldr: Deep learning classifiers + time series imagery can create some really noisy time series predictions. A hidden markov model (HMM), plus some heuristics, helps smooth things out. Also these figures are probably the most complicated ones I've done with #ggplot2
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I have not been posting many plant photos lately and I'm sorry. Here is a Stinging Serpent (Cevallia sinuata) with some bugs flying around it.
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I realized we more or less started the manuscript writing part of a group project, so I wrote down some guidelines based on how I've done it in the past:
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Here's a figure from a 1945 paper in The American Journal of #Botany, where the results of the experiment were size and number of leaves. They had all the plants on herbarium sheets, and arranged them with handwritten labels and annotations.
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