neuroscience, brain development, data. the odd beer.

Joined July 2016
Great study by @garedaba @StuartJoldham @jakob_seidlitz and colleagues, linking molecular and anatomical descriptions of the prenatal brain, now out in @NatureComms: Molecular signatures of cortical expansion in the human foetal brain 🧠🧬 nature.com/articles/s41467-0…
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Gareth Ball retweeted
🧠New pre-print🧠 In this work we study cortical neurite and soma architecture over development using ultra-strong gradient dMRI 🧲 MRI signatures of cortical microstructure in human development align with oligodendrocyte cell-type expression: biorxiv.org/content/10.1101/…
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Causal Cortical and Thalamic Connections in the Human Brain biorxiv.org/cgi/content/shor… #biorxiv_neursci
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The developing Human Connectome Project fetal functional MRI release: Methods and data structures biorxiv.org/cgi/content/shor… #biorxiv_neursci
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Spatial Single-cell Analysis Decodes Cortical Layer and Area Specification biorxiv.org/cgi/content/shor… #biorxiv_neursci
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Neurofibromatosis (#NF1) is a neurogenetic syndrome associated with learning impairments and a predisposition for glial tumors. We find that NF1 mutation causes an intrinsic deficit in oligodendrocyte precursor cell (OPC) differentiation. A thread 🧵 1/ nature.com/articles/s41593-0…
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Introducing BrainMorph, a foundation model for general purpose brain MRI registration! BrainMorph is a robust tool that supports multi-modal, pairwise, and scalable groupwise registration via rigid, affine, and nonlinear transformations. 🧵1/5 👇 for code, models, and paper!
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Spatiotemporal transcriptomic maps of mouse intracerebral hemorrhage at single-cell resolution biorxiv.org/cgi/content/shor… #biorxiv_neursci
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A collaboration with my neighboring lab is on Biorxiv. biorxiv.org/content/10.1101/… Dr. Jianglai Wu designed a curved light sheet microscope for high-speed, large-volume imaging. He imaged an entire intact cleared mouse brain at a voxel size of 0.625 × 0.625 × 1.25 μm3 within just 3 hours, eliminating the need for image tiling. This significantly saves time and, when combined with PEGASOS tissue clearing, allows for mesoscale projectome mapping at an unprecedented speed.
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Hot of the pre-print press! 🔥 Our latest work #spatialDLPFC pairs #snRNAseq and #Visium spatial transcriptomic data in the human #DLPFC building a neuroanatomical atlas of this critical brain region 🧠 @LieberInstitute @10xGenomics #scitwitter 📰 doi.org/10.1101/2023.02.15.5…
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Gareth Ball retweeted
New preprint explores how rare high-effect gene-coding variants (#CNVs) shape brain architecture and influence cognitive and socio-behavioral traits in adolescents (#ABCD). medrxiv.org/content/10.1101/…
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Specification of human regional brain lineages using orthogonal gradients of WNT and SHH in organoids biorxiv.org/cgi/content/shor… #biorxiv_neursci
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This recent GWAS preprint is the first to explore genetic influences on the age at onset of walking 🚶‍♀️🚶, a milestone that may indicate broader (neuro)developmental delays. Find out more⤵️ medrxiv.org/content/10.1101/…
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‼️We’re hiring! @CHOP_Research Seeking imaging/informatics folks and/or those passionate about human development/disease & imaging-genetics! Massive data sandbox (N>200k)! Highly collaborative & welcoming environment! DM/email or see us @OHBM @Aaron_A_B jobs.humanbrainmapping.org/j…
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Development of thalamocortical connectivity during the third trimester biorxiv.org/cgi/content/shor… #biorxiv_neursci
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Our preprint on thalamocortical connectivity in neonates is out!🧠👶 I'll do a summary later for those who have time to browse Twitter yet are too busy to read papers, but for now, I need a small break from thinking about this work😅#ittookovermylife biorxiv.org/content/10.1101/…
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Today, I’m thrilled have our lab’s work featured on the cover of @Nature In this article, we have developed a therapeutic approach for a severe condition called Timothy syndrome. This has been a long journey. It started with making hiPS cell-derived neurons in 2D cultures 15 years ago when I was a postdoc and continued with later creating in the lab #organoid and then #assembloid models of this disease caused by a mutation in a calcium channel. Over time, these human cellular models and the biological insights we gained enable us to design a therapeutic strategy, which we validated in vivo following circuit integration of patient-derived organoids into the rat brain. Grateful for the incredible work led by @XiaoyuChenxy and @fikribirey in the lab! And the many close collaborators who participated to this line of research over the years.
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