EMBO postdoc @teichlab @SCICambridge and @sangerinstitute / single-cell genomics and gene regulation / PhD in evodevo genomics @kaessmannlab @UniHeidelberg
Cambridge, United Kingdom
Joined February 2018
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It was a great honor to receive this award and a fantastic opportunity to return to Heidelberg and see many friends.
I am extremely grateful for having had the opportunity to work with @kaessmannlab and am already looking forward to my next visit! 🤗
We are extremely happy and proud that our former PhD student Ioannis @ioansarr was awarded the Ruprecht Karls Prize by the Heidelberg University Foundation for his outstanding PhD thesis!!🥳♥️ So well deserved...
Ioannis Sarropoulos retweeted
We are excited to announce an opportunity for a Research Assistant position in our group @SCICambridge @Cambridge_Uni to help with our work on the @humancellatlas using #organoids
jobs.cam.ac.uk/job/48837/
Ioannis Sarropoulos retweeted
Excited to share my PhD work in the lab of @larsplus @CRGenomica. We screened the activity of synthetic enhancers throughout myeloid differentiation. Combinations of activating TFs frequently neutralized each other or gained repression twtr.to/wiWIZ (1/n)
Ioannis Sarropoulos retweeted
Happy to share CREsted, our latest package on enhancer modeling! CREsted allows for training sequence-based deep learning models from scATAC-seq data, enhancer decoding and enhancer design through a variety of methods.
Check out the GitHub here: github.com/aertslab/CREsted. [1/9]
Ioannis Sarropoulos retweeted
Honoured to receive the Otto Schmeil prize by @hadw_bw! Grateful for the recognition of our research on cerebellum development and evolution. Huge thanks to Henrik @kaessmannlab and my closest colleagues @IoannisSarr and Kevin Leiss!
🎖️Heidelberger Akademie der Wissenschaften vergibt acht gestiftete Wissenschaftspreise an exzellente Early Career Researchers.
In den nächsten Wochen werden wir die ausgezeichneten hier vorstellen.
👉hadw-bw.de/sites/default/fil…
Ioannis Sarropoulos retweeted
We are delighted to share our new preprint entitled “A male-essential microRNA is key for avian sex chromosome dosage compensation” biorxiv.org/content/10.1101/…
Ioannis Sarropoulos retweeted
Update! Our paper, "Cellular development and evolution of the mammalian cerebellum", is now live in its final form @Nature . Enjoy open access into the evo-devo of cerebellar cell types:
nature.com/articles/s41586-0…
ALT Evolutionary change in gene expression in cerebellar cell types.
Ioannis Sarropoulos retweeted
Exciting news! Our latest research on "Cell type directed design of synthetic enhancers" has been published in @Nature. We've harnessed deep learning to design enhancers with cell-type specificity. Find our paper here: nature.com/articles/s41586-0…. Highlights below: [1/n]
Ioannis Sarropoulos retweeted
Extremely happy to see our paper out :) A big shoutout to everyone who contributed!
Excited to share the published version of our study on the development and evolution of the mammalian cerebellum, led by @sepp_mari and Kevin Leiss. Now out in Nature as an accelerated preview:
nature.com/articles/s41586-0…
Our paper on the development and evolution of mammalian cerebellar cell types is officially published!
Tremendous work by @sepp_mari and Kevin Leiss; it's been an absolute pleasure to be part of it.
Excited to share the published version of our study on the development and evolution of the mammalian cerebellum, led by @sepp_mari and Kevin Leiss. Now out in Nature as an accelerated preview:
nature.com/articles/s41586-0…
Ioannis Sarropoulos retweeted
If you are into thymus, quirky TECs❤️, spatial mapping and CCF frameworks-check our preprint below!👇🚨 It was a huge pleasure to pull this off with our creative inventor @YayonNadav🕵️♂️, T cell guru @lenamboehme👩🔬, imaging wizard @AndreaJRadtke🧝♀️ our labs and collaborators!!! 🤗🎉
Happy to share our work, a comprehensive single cell & spatial atlas of the human thymus, which uses our newly established common coordinate framework for the thymus, the Cortico-Medullary Axis (CMA), to spatially explore thymic development.#ThymusCCF tiny.cc/p7udvz
Ioannis Sarropoulos retweeted
Happy to share our work, a comprehensive single cell & spatial atlas of the human thymus, which uses our newly established common coordinate framework for the thymus, the Cortico-Medullary Axis (CMA), to spatially explore thymic development.#ThymusCCF tiny.cc/p7udvz
Ioannis Sarropoulos retweeted
Very happy to have my first paper out 💃! Thanks lot to @MargaridaMCM and @kaessmannlab
for their great support and guidance, and to all coauthors. It’s been an awesome journey to work with you on this project😊.
Our study on "Sex-biased gene expression across mammalian organ development and evolution” is out now in @ScienceMagazine! science.org/doi/10.1126/scie…
Ioannis Sarropoulos retweeted
Excited to share our work in @ScienceMagazine on the evolution and development of sex differences.
This study was led by @Leti_RM_96 and co-supervised by Henrik Kaessmann @kaessmannlab and I.
@TheCrick 🤝 @ZmbhH @UniHeidelberg
Check the 🧵 for more 👇
science.org/doi/10.1126/scie…
In this study, led by @Leti_RM_96 and co-supervised by @MargaridaMCM (Crick Institute), we decoded the programs that control the sex-specific development of major organs in selected species of mammals.
Ioannis Sarropoulos retweeted
Our study on "Sex-biased gene expression across mammalian organ development and evolution” is out now in @ScienceMagazine! science.org/doi/10.1126/scie…
Ioannis Sarropoulos retweeted
Our study on the lamprey neural cell type atlas and the origins of the vertebrate brain, led by @frnclmn and @FranciscaHervas, is now out in @NatureEcoEvo!
nature.com/articles/s41559-0…
Ioannis Sarropoulos retweeted
We're thrilled to announce that Rasa Elmentaite @elmentaite, a former TeichLab PhD student, phenomenal young scientist, has been awarded the prestigious Beddington Medal by @TheBSDB for her groundbreaking work in human gut development. 🧬🏅
Read more: bsdb.org/2023/09/04/2023-bsd…
Ioannis Sarropoulos retweeted
📢 Great news! Our manuscript focusing on the search for the cells of origin in cerebellum tumors has been published in #NeuroOncology! Check out the article here: academic.oup.com/neuro-oncol… Many thanks to all collaborators for their hard work and dedication. #BrainTumors @NeuroOnc
Incredibly excited and honoured to be joining this fantastic line-up of speakers!
Abstract submission is still open until April 23!
📢 Full program is out!! 📢
The Ecological and Evolutionary Genomics @GordonConf is going to be such an absolute treat!
Don't miss the talk abstract deadline on ✨April 23✨ - all submitted posters are eligible!
grc.org/ecological-and-evolu…
Ioannis Sarropoulos retweeted
Happy to announce that our story on #DNAmethylation at #enhancers is out today in @MolecularCell! tinyurl.com/smc5yccy
It was a fantastic PhD journey in the lab of @arnaud_kr @EMBL.
Follow the 🧵 to find out whether #DNAmethylation is important for enhancer activity:
(1/9)
ALT Graphical abstract showing that by exploiting single molecule footprinting we were able to identify that most active enhancers are not sensitive to DNA methylation.