Jonathan Panzer (@jj_panzer) header
Jonathan Panzer (@jj_panzer) profile picture

A 4th-year PhD candidate studying the microbiome of the female reproductive tract using R & Python. Expertise in bioinformatics & computational biology.

Joined December 2016
Photo by Jonathan Panzer (@jj_panzer)Photo by Jonathan Panzer (@jj_panzer)Photo by Jonathan Panzer (@jj_panzer)Photo by Jonathan Panzer (@jj_panzer)Photo by Jonathan Panzer (@jj_panzer)
Jonathan Panzer retweeted
Exciting news! Our latest single-cell RNA-seq study in @ScienceTM is out! Dive into the details of maternal-fetal crosstalk during parturition: science.org/doi/10.1126/scit… Big shoutout to the fantastic former #PRBTeam #NGLLab @valeriaqbp @rogerpique @AJOGEd_RR @AdiTarca @NICHD_NIH
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A step in the right direction on the way to classifying the prokaryotic world! 🦠 asm.org/Articles/2023/July/S…
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Tackling preterm birth with immune cells? Yes, M2 macrophages are the solution! Learn how these remarkable cells combat sterile inflammation to prevent preterm birth and bolster neonatal immunity. bit.ly/3OnZmfi @nardhygomez’s lab #NGLlab @waynemedicine @NICHD_NIH
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Jonathan Panzer retweeted
My first postdoc paper is now out! We explored the microbe-immune mechanisms underlying preterm birth (PTB), the global leading cause of neonatal and childhood mortality. A short 🧵 1/6 doi.org/10.1111/aji.13749 #AJRI @ASReproImmuno
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Jonathan Panzer retweeted
TSLP: Insights into the host response against microbial invasion in the amniotic cavity during preterm labor. Check out @KanninenTomi’s MFM thesis! 👏🔬 #PretermLabor #Maternal #Fetal #Immunity: authors.elsevier.com/a/1hN7b… #PRB #NGLLab @KevinRTheis’s lab @DMC_Heals @waynemedicine
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The placenta does not harbor a microbiome. We have performed an exhaustive investigation across studies. Please check out our recently published critical review and re-analysis of published placental microbiota datasets: tinyurl.com/y3wepxy8 (1/10)
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In summary, we report that environmental and delivery-associated contamination impacted the bacterial DNA signal of placental samples in these 15 datasets, and that predominant ASV consistency across placental samples restricted to term cesarean deliveries was not found. (9/10)
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Given that study origin and mode of delivery heavily influenced the bacterial profile structure of placental samples, we conclude that placentas from typical term pregnancy are unlikely to be the original source of any bacterial DNA signal. (10/10)
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Jonathan Panzer retweeted
Announcing R/Medicine 2023! {r-bloggers.com/?p=339889} #rstats #DataScience
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Jonathan Panzer retweeted
"The amniotic fluid proteome changes with term labor and informs biomarker discovery in maternal plasma" was published today in Scientific Reports rdcu.be/c6dG3 . I am grateful my postdoc @gauravbhattiwsu & collaborators @nardhygomez @KevinRTheis @rogerpique @AJOGEd_RR
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Jonathan Panzer retweeted
Abduladheem Turki Jalil published 116 papers in 2022, or 1 roughly every 3 days. In 2023 he already has 30, more than 1 every 2 days. Be impressed if he can get to daily publication. forbetterscience.com/2022/10…
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