ryanlayer (@ryanlayer) header
ryanlayer (@ryanlayer) profile picture

Making science faster with algorithms. Assistant prof CU Boulder, Computer Science and BioFrontiers.

Boulder, CO
Joined October 2008
Congrats to Murad Chowdhury! His #ASHG22 poster got a Reviewers Choice Award. Check it out for yourself how he is using population-scale data to improve samplot #SV visualization. PB2317 Thursday 10/27 3-445. github.com/ryanlayer/samplot
13
Apps are open for Interdisciplinary Quantitative Biology #PhD Program at @CUBoulder @BioFrontiers Learn both sides of #quantitative #biology with funded rotations through wet and dry labs among 11 departments. colorado.edu/certificate/iqb…
2
2
Our work on integrating population data into SV analysis can be found at github.com/ryanlayer/stix and github.com/ryanlayer/samplot If you missed the talk check out this recording youtu.be/TsekM1VjFrA #GI2022
1
9
A proud PI moment when @michael_boulder got Bio-Ontologies Best Poster at @iscb #ISMB2022 he also gave a hell of a talk youtu.be/P0r1CkY7V3A
2
11
A view of the #marshalfire tonight. From Lafayette looking South West.
1
4
.@dailycamera has an article saying Broomfield, unlike EVERYWHERE else, didn’t have a post-thanksgiving surge. Any ideas on how they attribute their early Dec spike? dailycamera.com/2020/12/18/t…
1
I'll go first. It's pretty tame. I used this one to find lncRNA that could be involved in muscle differentiation in this paper mcb.asm.org/content/35/3/498
7
Boulder county CO 18 & 19 year olds may be the first population to reach #COVID19 herd immunity.
When your #COVID19 numbers start looking scary (see Fig 1), just make a new graph (see Fig 2)!!
1
5
How to know when a tomato is perfectly ripe...
3
1
22
I have heard about how the demographics of #COVID19 infections are shifting. This plot drove it home. X gives dates Y gives # of infections in Boulder Co. Orange is assoc w/ long term care Blue is not. The shift is like an on/off switch. Also, stack bar charts were a bad choice.
4
Here is a talk I gave to @BioFrontiers about our work (@DanLarremore @baileyfosdick @TheMikeyBrad and more) on monitoring social distancing at the county/city/campus scale youtube.com/watch?v=2lhvKg1t… Obligory interruption by child at 17:15
3
5
@UtahCoronavirus here is an example of how activity has changed (or not) in SLC cities over the past few weeks versus a baseline. We have other metrics too