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Our lab is excited to share our latest preprint describing the BR-body proteome with huge help from @wschilders44 @JulieBiteenLab @ChampionNd and Elaine Zhu's lab @WayneStateEng @WSUBioSci
biorxiv.org/content/10.1101/…
Jared Schrader retweeted
Stress Changes the Bacterial Biomolecular Condensate Material State and Shifts Function from mRNA Decay to Storage biorxiv.org/cgi/content/shor… #biorxiv_biophys
Jared Schrader retweeted
Polyphosphate affects cytoplasmic and chromosomal dynamics in nitrogen-starved Pseudomonas aeruginosa | PNAS pnas.org/doi/10.1073/pnas.23…
Jared Schrader retweeted
A rapid inducible RNA decay system reveals fast mRNA decay in P-bodies: nature.com/articles/s41467-0…
Jared Schrader retweeted
A conserved morphogenetic module that controls complex bacterial cell shapes. elifesciences.org/articles/8…
Jared Schrader retweeted
Genome-wide profiling of Hfq-bound RNAs reveals the iron-responsive small RNA RusT in Caulobacter crescentus | mBio journals.asm.org/doi/10.1128…
Jared Schrader retweeted
Congrats to former postdoc Felix Keber from our & @MartinWuhr lab on this fascinating paper using filtration experiments w mass spec to show that ubiquitous mesoscale condensate formation across >18% of the proteome. rdcu.be/dzXsA
Jared Schrader retweeted
Our story on tracking the in vivo NusG whereabouts is on @MolecularCell! NusG rarely walks alone, enjoys 30S company, works out on anti-terminating and TT-coupling. True saga by brilliant @HAFEZELSAYYED, super support by
@ojp25 @M_Stracy and Max Gottesman! sciencedirect.com/science/ar…
Jared Schrader retweeted
Thrilled to finally announce our work on the selectivity of disordered protein condensation in @NatureChemistry. Great collaboration with @JeetainMittal Led by @rmwelles and @kandarp_sojitra. rdcu.be/dxP4r. See related work by Brangwynne lab rdcu.be/dzddw
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Excited to see beautiful manuscript led by @RanaUshnish & Kevin w @iAmAllAdhesion @M_T_Walls @javalosLAB & AZP out in @NatureChemistry (...after 5 mo. copyediting :( rdcu.be/dzddw Also see related co-submission by @buenoscience & @JeetainMittal rdcu.be/dxP4r
Jared Schrader retweeted
Interested in the mechanisms driving subcellular organization in bacteria?
The Vecchiarelli lab has a postdoc position available!
docs.google.com/document/d/1…
Plz RT!
Jared Schrader retweeted
Happy to see this one in the print 🙂 We describe how disordered prion-like domains can drive selective co-condensation of fusion oncoproteins with chromatin remodelers😎 Postdoc @richoodavis led this work with two talented grad students. 👏👏👏
nature.com/articles/s41467-0…
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How does cellular stress affect #RNA? We sequence entire RNA molecules with @nanopore sequencing. We find 👉Global RNA decay mediated by XRN1, independent of poly(A) tail! 👉Decay absolutely depends on stress-granule formation! biorxiv.org/content/10.1101/…
Jared Schrader retweeted
Great to participate in this led by @HymanLab, Simon Alberti, @JeetainMittal and w/ @AyalaLab1, @titus_franzmann probing how cysteine oxidation aggregates TDP-43
Intra-condensate demixing of TDP-43 inside stress granules generates pathological aggregates biorxiv.org/content/10.1101/…
Jared Schrader retweeted
This is a very exciting paper with one of the clearest applications so far to take advantage of bacterial single-cell RNA-seq's ability to pull apart heterogenous gene expression within populations. Highly recommend! nature.com/articles/s41586-0…
Jared Schrader retweeted
We have a new story out at BiorXiv! Amazing work led by @za_curtis (Bisson), Pedro Escudeiro (Alva) and John Mallon (Bisson).
Great collaboration with @Vikram_Alva (Max Planck) and @pohlschr (UPenn).
A summary of our findings in the thread (1/22)
shorturl.at/fLPR1
Jared Schrader retweeted
What determines polar mRNA localization in E. coli?
Shanmugapriya Kannaiah, @OChoder et al @Hujimed find the polar transcriptome to depend on MinD inhibition of RnaseE recruitment
embopress.org/doi/full/10.10…
Jared Schrader retweeted
In a new paper in @Nature, an impressive and creative series of insights led @DDunkelmann and coworkers in Jason Chin’s lab to develop a powerful, general in vitro selection for aminoacyl-tRNA synthetase enzymes that charge tRNAs with a wide variety of small molecules, including those not necessarily compatible with known ribosome variants (yet). They used this system to create aaRSs that enable beta-amino acids and alpha,alpha-disubstituted amino acids to be site-specifically incorporated into proteins, solved the structure of GFP containing meta-brominated beta-phenylalanine as the third residue as confirmation, and advanced the non-canonical biopolymer field forward in the process.
Wow. Brilliantly explained in the thread below. 👏👏🍻
This Post is from an account that no longer exists. Learn more
Jared Schrader retweeted
Late consolidation of rRNA structure during co-transcriptional assembly in E. coli by time-resolved DMS footprinting biorxiv.org/cgi/content/shor… #bioRxiv
Anyone able to recommend vertical PAGE rigs for preparative RNA purification after T7 transcription? I inherited all my PhD Adviser Olke Uhlenbeck's old gel rigs when he retired, but they were all custom built, so I need to find commercially available replacements.
Jared Schrader retweeted
Now published:
The virulence regulator VirB from Shigella flexneri uses a CTP-dependent switch mechanism to activate gene expression
A great collaboration with W. Steinchen, @diepold_lab, Timo Glatter, @BangeBalcony, @KaHochberg
rdcu.be/dvfXz @SYNMIKRO @mpi_marburg
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