subseq.bio

Design symmetric biomolecules on subseq.bio

🎉PROMO: To celebrate major program releases, RFD4-Proteina and BioEmu2, as well as other major improvements, you may use a new promo code (check image) for $100 worth of credits. To apply, go to account -> Funding -> Use Promo

RFD4-Proteina is now available on Web, API, and MCP! A joint release by Baker Lab and NVIDIA: design biomolecular complexes with sequence–structure co-design, motif and binding-site conditioning, and partial diffusion. Try it now for free on Subseq!

BioEmu2 is now available on web, API, and MCP! Equilibrium ensemble sampling for proteins, nucleic acids & ligands — up to ~1,000,000× faster than traditional md simulation github.com/microsoft/bioemu2

Got a molecular design idea? Send it over and have all work done for you, from concept to ranked candidates. Use the new form, or DM here or @0xCF88

🧬 Protenix-v2 is now available on subseq A high-accuracy all-atom cofolder for challenging antibody–antigen complexes, #3 on CoFold Arena, with optional physics-guided protein–ligand sampling. github.com/bytedance/Proteni… Available over web, API & MCP

New options for API keys on subseq: - read-only, vs read/write - optional project scope This enables much more programmatic flexibility. (Applies to all accounts, including teams)

🧬 OpenDDE is now available on Subseq An open-source, all-atom model bringing IsoDDE-level co-folding accuracy to a reproducible framework—predicting multi-component complexes together. github.com/aurekaresearch/Op…

AI agents are first-class users on Subseq. Connect your scientific agents to Subseq via MCP in just a few click and begin designing complex protein design campaigns. Here's a short video connecting with Claude, and having it design a reusable binder design template👇

🧪 Pipelines got a major overhaul. Run biomolecular campaigns repeatably, end-to-end with shared inputs and reusable templates. Compose from 20+ design, analysis, and simulation programs.