Co-founder/CEO @KPL_ApS , Proteomics researcher in Copenhagen, Denmark @UCPH_health @NNFCPR . science, technology, culture, memes and vibes.
Copenhagen, Denmark
Joined June 2008
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Tanveer Batth retweeted
Finally a more intuitive way to learn pLDDT/pAE? 😎
sokrypton.github.io/protein_…
(Character idea from @HannesStaerk & Alex Waldherr)
Tanveer Batth retweeted
Can MS-based proteomics see what histology can’t? We profiled 83 rare paediatric adrenocortical tumours from archival FFPE tissue & found 4 proteome-defined states that predict survival better. Now in @eBioMedicine, led by Rainer Claus & Andreas Metousis. doi.org/10.1016/j.ebiom.2026…
Tanveer Batth retweeted
NEW: A U-Copenhagen scientist voiced concerns that Claude might have trained on his enzyme research.
Anthropic's head of life science tells me he is "absolutely certain that that did not happen" in a new interview with @endpts
Full Q&A: endpoints.news/qa-anthropics…
Tanveer Batth retweeted
We have released DIA-NN 2.7. Performance improvements (more proteins) and GUI improvements. In particular, added a data completeness filter for pathway analysis. Further feedback on how to improve statistics and visualisation in DIA-NN is very welcome!
Tanveer Batth retweeted
After OpenAI stole the navier stokes work it is obvious that big orgs and universities will need to have their own AI centers running their private IP just like they have their own supercomputers.
Imagine being a big pharma company using ChatGPT rn.
That is urgent.
Tanveer Batth retweeted
There is a super shady data control setting on everyone's ChatGPT which makes it seem like your data can be used for training even if you explicitly say to *NOT* improve the model for everyone (1/9)
Readers added context they thought people might want to know
This claim is false. OpenAI has clarified that the in-app toggle and the privacy portal are independent ways to opt out of data training. You only need to use one method, and OpenAI respects the opt-out choice regardless of where it is set.
x.com/thsottiaux/sta…
help.openai.com/articles/77308…
Tanveer Batth retweeted
We're excited to be hiring an experienced chemoproteomics / surfaceomics researcher to help build new platforms with us at @Deliverome in a joyful, mission-driven environment. Come build at industry speed while making your work openly available for the benefit of all people.
Tanveer Batth retweeted
OpenDDE - An Apache-2.0 licensed co-folding method that approaches IsoDDE in performance and beats Proteinix-v2 and ESMFold2🚀
Code - github.com/aurekaresearch/Op…
Paper - github.com/aurekaresearch/Op…
Tanveer Batth retweeted
1/5
Cell identity is written in the proteome, not in the DNA, and not always in the RNA. Out on bioRxiv today: The first cell type-resolved, MS-based proteomic atlas of the human body.
biorxiv.org/content/10.64898…
Tanveer Batth retweeted
#TeamMassSpec: any independent data on dual-column LC creating subtle batch effects in LFQ proteomics?
Thinking column A/B intensity shifts, missingness, RT drift, or condition-column confounding. Vendor claims are nice; real-world datasets would be nicer.
Tanveer Batth retweeted
Sci-Hub is an evil website that pirated 85M+ research papers and made them freely available
And now they've added AI to their database to make Sci-Bot.
It answers your questions using latest, full-text articles.
But DO NOT use it. We should all try to make billion-dollar academic publishers richer.
I'm putting the link below so you know how to avoid it.
Tanveer Batth retweeted
Does identifying thousands of plasma proteins mean more biology? Not always. Over half of 210 published datasets contain contamination markers reported as disease biomarkers.
Tanveer Batth retweeted
I’m looking for an automated way to read others’s scientific data without giving credit or acknowledgement, and also claim full credit for insights from it. And I want it to have a fitting name
OAI: say no more
Tanveer Batth retweeted
reddit.com/r/proteomics/s/gQ…
Latest Bruker or Thermo #TeamMassSpec instrument for #proteomics? Please share your honest experience (anonymously if you want)! Sometimes it is more than just the specs (ie. price, robustness, maintenance, software)
#massspectrometry
Tanveer Batth retweeted
Our latest paper with @atul_deshmukh1 is now out in @JPhysiol. We developed FibeRtypeR to infer muscle fiber type from transcriptome or proteome data. Would be great to receive feedback on it. @TeamDerave @ugent_fge
Paper: physoc.onlinelibrary.wiley.c…
Tool: ccgg.ugent.be/shiny/fibertyp…
Tanveer Batth retweeted
It just seems implausible this is what we are made of, essentially, nanotechnology about a billion years beyond anything we can design or make ourselves.
